Citation
Abdul Rahman, Mohd Fadhil
(2018)
Characterization, modelling and purification of a Molybdenum-reducing enzyme from a seawater-tolerant Bacterium.
Doctoral thesis, Universiti Putra Malaysia.
Abstract
Molybdenum, which is an emerging pollutant is toxic to spermatogenesis in several
animal model and to ruminants. In Malaysia, the source of molybdenum pollution is
from the dumping sites of waste oil lubricant. Molybdenum can be reduced to
molybdenum blue by bacteria and form the basis for bioremediation of molybdenum. A
novel seawater-tolerant Mo-reducing bacterium has been isolated from Pantai
Merchang, Terengganu 1. The bacterium was identified by molecular phylogenetic
analysis as Kluyvera sp. strain UPM-FR1. The optimum conditions for Mo reduction
by using One-Factor-at-a-Time (OFAT) method showed that sucrose at between 30 and
50 g/L was the best carbon source. Ammonium sulphate at 10 g/L was the best nitrogen
source. The optimal initial pH and temperature were pH 6.0 and from 27 to 35°C,
respectively. The optimum phosphate concentration was 2 mM and the optimum
molybdate concentration was 10 mM. The Mo-reducing capacity was strongly inhibited
by the heavy metal mercury, followed by copper, silver and chromium. Optimization of
Mo-reduction through Response Surface Method (RSM) begins with a pre-screening
Plackett–Burman method which showed that molybdate (A), phosphate (B), pH (C),
incubation time (G), and pH and phosphate (BC) were the significant (P<0.05)
parameters influencing Mo-blue production. Surface plots show the optimum
concentration of molybdate and phosphate occurred at 30 mM and 3.95 mM,
respectively, while the optimum concentrations of molybdate concentration and pH
occurred at 30 mM and 6.8, respectively. Surface plots also indicated that the optimum
concentrations of molybdate concentration and time occurred at 30 mM and 36 h,
respectively while the optimum concentrations of phosphate concentration and pH
occurred at 3.95 mM and 6.25, respectively. The best solution satisfying the optimality
goal was molybdenum at 34.89 mM, phosphate 4.04 mM, pH 6.81 and incubation time
of 34.92 h, with the overall Mo-blue production of 12.6 compared to OFAT at 6.7
absorbance value. Modelling studies showed that the best primary model was modified
Logistics model, while secondary modelling showed that the Luong model was the best
with the calculated value for the Luong’s constants, which were qmax, Ks, Sm, and n that were 2.22±5 mole Mo-blue hr-1, 23.14±7.45 mM, 70.34±1.67 mM and 1.34±2.21,
respectively. On the other hand, the best kinetic model for the effect of molybdate on
molybdenum bioremoval rate using the dialysis tubing method was the Yano model.
The calculated value for the Yano’s constants, which are qmax, Ks, Ki, and n were 2.454
±2.12 mole Mo-blue hr-1, 24.18±4.23 mM, 87.82±8.19 mM and 0.258±0.121,
respectively. Prior to the purification of the Mo-reducing enzyme, initial experiments
shows that the Mo-reducing enzyme was stable in between pH 7 and 7.5. Both DTT
and -mercaptoethanol are capable to restore the Mo-reducing enzyme activity. The
results also show that none of the metabolic inhibitors inhibited the Mo-reducing
enzyme from this bacterium suggesting that the electron transport system is not the site
of Mo reduction to Mo-blue. The crude enzyme extract was fractionated with
ammonium sulphate (40-50% fraction) and gel filtration on GF-250 yielding a 19.8
fold purification. The Mo-reducing enzyme is estimated to be at 100 kDa. The purified
enzyme shows a maximum activity at pH 5.5 and a maximum activity in between 30
and 35oC. The Vmax for NADH and NADPH were at 8.6±0.25 (± standard error value)
and 8.01±0.51 nmole Mo blue/min/mg protein, respectively. The apparent Km for
NADH and NADPH were 1.55±0.16 mM and 4.15±0.64, respectively. The Vmax and Km
for LPPM were 8.755±0.26 nmole Mo blue/min/mg protein and 3.37±0.35 mM,
respectively. To conclude, all of the objectives in this thesis have been accomplished
and a novel Mo-reducing bacterium with a novel seawater tolerant capacity had been
isolated and characterized. This bacterium will be very useful in remediating
molybdenum pollution in the coastal areas or in seawater using the dialysis tubing as an
entrapment tool.
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