UPM Institutional Repository

The effect of N-terminal domain removal towards the biochemical and structural features of a thermotolerant lipase from an Antarctic Pseudomonas sp. strain AMS3


Citation

Latip, Wahhida and Raja Abdul Rahman, Raja Noor Zaliha and Thean, Adam Chor Leow and Mohd Shariff, Fairolniza and Ahmad Kamarudin, Nor Hafizah and Mohamad Ali, Mohd Shukuri (2018) The effect of N-terminal domain removal towards the biochemical and structural features of a thermotolerant lipase from an Antarctic Pseudomonas sp. strain AMS3. International Journal of Molecular Sciences, 19 (2). art. no. 560. pp. 1-18. ISSN 1661-6596; ESSN: 1422-0067

Abstract

Lipase plays an important role in industrial and biotechnological applications. Lipases have been subject to modification at the N and C terminals, allowing better understanding of lipase stability and the discovery of novel properties. A thermotolerant lipase has been isolated from Antarctic Pseudomonas sp. The purified Antarctic AMS3 lipase (native) was found to be stable across a broad range of temperatures and pH levels. The lipase has a partial Glutathione-S-transferase type C (GST-C) domain at the N-terminal not found in other lipases. To understand the influence of N-terminal GST-C domain on the biochemical and structural features of the native lipase, the deletion of the GST-C domain was carried out. The truncated protein was successfully expressed in E. coli BL21(DE3). The molecular weight of truncated AMS3 lipase was approximately ~45 kDa. The number of truncated AMS3 lipase purification folds was higher than native lipase. Various mono and divalent metal ions increased the activity of the AMS3 lipase. The truncated AMS3 lipase demonstrated a similarly broad temperature range, with the pH profile exhibiting higher activity under alkaline conditions. The purified lipase showed a substrate preference for a long carbon chain substrate. In addition, the enzyme activity in organic solvents was enhanced, especially for toluene, Dimethylsulfoxide (DMSO), chloroform and xylene. Molecular simulation revealed that the truncated lipase had increased structural compactness and rigidity as compared to native lipase. Removal of the N terminal GST-C generally improved the lipase biochemical characteristics. This enzyme may be utilized for industrial purposes.


Download File

[img] Text
The effect of N-terminal domain removal towards the biochemical .pdf

Download (9kB)
Official URL or Download Paper: https://www.mdpi.com/1422-0067/19/2/560

Additional Metadata

Item Type: Article
Divisions: Faculty of Biotechnology and Biomolecular Sciences
DOI Number: https://doi.org/10.3390/ijms19020560
Publisher: MDPI
Keywords: Microbial enzyme; N-terminal domain; Biochemical characterization; In silico; Lipase; Antarctic
Depositing User: Mohamad Jefri Mohamed Fauzi
Date Deposited: 22 Sep 2021 22:45
Last Modified: 22 Sep 2021 22:45
Altmetrics: http://www.altmetric.com/details.php?domain=psasir.upm.edu.my&doi=10.3390/ijms19020560
URI: http://psasir.upm.edu.my/id/eprint/74147
Statistic Details: View Download Statistic

Actions (login required)

View Item View Item