Citation
  
    
    Al-Azawy, Amer Khazaal Salih
  
    (2011)
  
 
Isolation, identification and molecular characterization of feline coronavirus in Malaysia.
    Doctoral thesis, Universiti Putra Malaysia.
  
  
  
    Abstract
    Feline infectious peritonitis virus (FIPV) and feline enteric coronavirus (FECV) are
 coronaviruses causing disease in cats. FIPV is a highly fatal and immune-mediated
 pyogranulomatous disease, whereas FECV is asymptomatic and a subclinical or mild
 enteric infection. Both FIPV and FECV are further subdivided into serotypes I and II.
 Cases of FIP occur in young and adult cats with varying degree of severity. In Malaysia,
 Feline coronavirus (FCoV) is prevalent where 100% of cats in catteries developed
 antibodies against the feline coronavirus. However, 84% of cats kept in catteries and
 shelters, were found to have viral genome of feline coronavirus in their feces. FIP is
 believed to be mutated from FECV and the virus has tropism towards the macrophages.
 Although many cats can be infected with FCoV, only 10% will develop FIP disease.
 There is no effective vaccine to control the disease because immunized cats are found to
 be more susceptible to infection than unvaccinated cats due to the antibody-dependent
 enhancement (ADE) phenomena. Although the FCoV is prevalent in Malaysia, the virus causing the disease has not been characterized and serotype. The study was conducted
 to isolate, identify, characterize and type the local feline coronavirus. The local isolates
 and two reference strains of FCoV were compared with respect to their biological
 properties, morphology and genome homology. A total of 42 cats clinically suspected of
 having FIP disease were obtained during the 4 years period (2007-2010) and were
 designated as UPM1C/07 to UPM42C/10. Affected cats showing respiratory distress
 with distended abdominal cavity were sampled. Ascites fluid or tissues from cat dying
 from FIP were screened for FCoV by a one-step reverse transcriptase polymerase chain
 reaction (RT-PCR) assay and adapted in Crandell feline kidney (Crfk) and Felis catus
 whole foetus (Fcwf-4) cell cultures. About 95% (40/42) of them were positive by virus
 isolation and confirmed by RT-PCR. Upon infection into two cell lines, infected cells
 showed cytopathic effect (CPE) characterised by giant cells, ballooning and detachment
 of infected cells. Fcwf-4 cell line provides more suitable growth conditions for local
 isolate FCoVs. Representative of three FCoV isolates namely the UPM5C/O8,
 UPM11C/08 and UPM24C/09 were clone purified by limiting dilution and were used for
 subsequent studies. Identification of the virus isolates was conducted by indirect
 immunofluorescent (IIF), indirect immunoperoxidase (IIP), haematoxylin and eosin
 staining (H&E) and transmission electron microscope (TEM). The study showed that
 FCoV multiply in the cytoplasm of infected cells. The virus particles possessed the
 characteristic of coronavirus with spherical shapes and surrounded by club shaped
 peplomers indicative of typical coronavirus.
 The determination of the serotypes of local FCoV and their phylogenetic relatedness was
 performed by analyzing their S gene region using published primers. Following analyses, 97.5% and 2.5% of local FCoV isolates belonged to serotypes I and II,
 respectively. Phylogenetic analysis performed on selected 12 FCoV type I local isolates
 on the S region showed that the homology amongst them ranged from 92.3-100% and
 decreased to 90% with reference viruses. Whereas the local FCoV type II has 97.5-99%
 homology with reference strains. Malaysian FCoV isolates fall in 3 clusters where 2
 clusters comprise most of type I which are closer to the USA, Netherlands, UK, Japan
 and Taiwan isolates, and third cluster comprises the type II which is in the group of
 reference viruses of USA and Italy.
 In conclusion, this is the first detailed study on isolated local feline coronavirus in an
 attempt to adapt the viruses in vitro and characterize them. About 95% (40/42) of cats
 that were naturally infected with feline coronavirus have the viral genome in their body
 excretion. The isolated viruses were adaptable in cell culture and induce of cytopathic
 effect. FCoV type I was highly prevalent amongst the local cats.
 
  
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