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Identification of metabolites from Halamphora sp. and its correlation with quorum sensing inhibitory activity via UHPLC-ESI-MS/MS-based metabolomics and molecular networking


Citation

Abd Ghafar, Siti Zulaikha and Muthukrishnan, Sarmila and Zolkeflee, Nur Khaleeda Zulaikha and Natrah, Ikhsan (2025) Identification of metabolites from Halamphora sp. and its correlation with quorum sensing inhibitory activity via UHPLC-ESI-MS/MS-based metabolomics and molecular networking. Chemistry and Biodiversity, 22 (4). art. no. e202402282. ISSN 1612-1872; eISSN: 1612-1880

Abstract

The UHPLC-MS/MS metabolomics approach was employed to profile and characterize multi-components in Halamphora sp. extracted with different solvents that contribute to quorum sensing inhibitory (QSI) activity. A total of 37 and 34 metabolites were tentatively identified from negative and positive ion modes, respectively. The metabolites have been assigned to various groups, including fatty acids, glycolipids, sterols, diazines, flavonoids, peptides, carotenoids, and pigments. Multivariate data analysis showed that the QSI activity in the acetone extract was due to tumonoic acid A, terpeptin derivatives, pheophorbide A, hydroxyhexadeca-1,5-dien-3-ynoxy]propane-1,2-diol, l-methionyl-l-tyrosine, stearidonic, hexadecadienoic, tricosenoic, palmitic, and linolenic acids. These metabolites were more concentrated and differed significantly in acetone extract compared to other extracts. Acetone extract displayed a cluster of nodulisporic acid and fucoxanthin through MS/MS-based molecular networking (MN) platform. The present study shows that the liquid chromatography mass spectrometry (LCMS)-based metabolomics and MN effectively identify QSI-active metabolites in Halamphora sp. extracts, which can be promoted as a natural antifoulant.


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Additional Metadata

Item Type: Article
Subject: Biochemistry
Subject: Marine Biology
Subject: Analytical Chemistry
Divisions: Faculty of Agriculture
Faculty of Food Science and Technology
Institute of Bioscience
DOI Number: https://doi.org/10.1002/cbdv.202402282
Publisher: John Wiley and Sons Inc
Keywords: Global Natural Products Social (GNPS); Halamphora sp; liquid chromatography mass spectrometry (LCMS) metabolomics; molecular networking (MN); quorum sensing inhibitory (QSI)
Depositing User: Ms. Nuraida Ibrahim
Date Deposited: 15 Jan 2026 04:28
Last Modified: 15 Jan 2026 04:28
Altmetrics: http://www.altmetric.com/details.php?domain=psasir.upm.edu.my&doi=10.1002/cbdv.202402282
URI: http://psasir.upm.edu.my/id/eprint/122370
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