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Development of a modified method for sequencing high G:C regions in chicken anemia virus genome


Citation

Chowdhury, S.M.Z.H. and Omar, A.R. and Aini, I. and Hair-Bejo, M. (2002) Development of a modified method for sequencing high G:C regions in chicken anemia virus genome. Journal of Biochemistry, Molecular Biology and Biophysics, 6 (3). pp. 229-232. ISSN 1025-8140; eISSN: 1025-8140

Abstract

Two areas in the chicken anemia virus (CAV) genome have high G:C content with secondary structures. These two G:C rich areas could not be sequenced with Perkin Elmer's Big Dye Terminator Cycle Sequencing Kit. Several modifications were carried out to solve the problem. Finally, a package of modified method was developed to sequence the high G:C areas. The result showed that the Perkin Elmer's Big Dye Terminator Cycle Sequencing Kit with the normal procedures are not suitable for sequencing the high G:C regions of the CAV genome. The present developed method made the Perkin Elmer's Kit useful for the first time to sequence the G:C rich hairpin structures of the CAV genome. The system may be useful to sequence all other G:C rich DNA templates.


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Additional Metadata

Item Type: Article
Divisions: Faculty of Veterinary Medicine
DOI Number: https://doi.org/10.1080/10258140290022310
Publisher: Taylor & Francis
Keywords: Chicken anemia virus; Cloning; DNA templates; Sequencing G:C rich region
Depositing User: Mohamad Jefri Mohamed Fauzi
Date Deposited: 03 Mar 2025 02:56
Last Modified: 03 Mar 2025 02:56
Altmetrics: http://www.altmetric.com/details.php?domain=psasir.upm.edu.my&doi=10.1080/10258140290022310
URI: http://psasir.upm.edu.my/id/eprint/115317
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