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Molecular characterization and phylogenetic analysis of Pantoea stewartii subspecies stewartii causing bronzing disease of jackfruit in Malaysia based on cps and hrp gene sequences


Citation

Ibrahim, Rohaya and Ismail Suhaimy, Noor Wahida and Tan, Shu Qing and Ismail, Siti Izera and Abidin, Nuraizat and Hakiman, Mansor and Karam, Daljit Singh and Ahmad Hamdani, Muhammad Saiful and Yusof, Mohd Termizi and Zulperi, Dzarifah (2020) Molecular characterization and phylogenetic analysis of Pantoea stewartii subspecies stewartii causing bronzing disease of jackfruit in Malaysia based on cps and hrp gene sequences. Journal of Plant Pathology, 102. 193 - 199. ISSN 1125-4653; ESSN: 2239-7264

Abstract

Bronzing disease of jackfruit was first detected in plantation areas in Selangor and Pahang, Malaysia. The symptoms included reddish discoloration of the affected fruit pulp and rags, which could reduce the fruit quality and discourage purchasers. In this study, species-specific PCR amplification with primers encoded for cps and hrp virulence genes showed all bacterial strains isolated from infected jackfruits with bronzing symptoms, displaying a 1.1 kb and 0.9 kb amplicon. Phylogenetic analyses of the cps and hrp gene sequences clustered all strains to Pantoea stewartii subspecies stewartii (P. stewartii subsp. stewartii) reference strains (GenBank accession Nos. AF077292, AF282857, KY965964 and KY965965), with 62 to 80% similarity. Results revealed the presence of these virulence genes in P. stewartii subsp. stewartii strains is required for pathogenicity of the bacterium in jackfruit.


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Additional Metadata

Item Type: Article
Divisions: Faculty of Agriculture
Faculty of Biotechnology and Biomolecular Sciences
DOI Number: https://doi.org/10.1007/s42161-019-00383-7
Publisher: Springer
Keywords: Pantoea stewartii subspecies stewartii; Bronzing disease; Virulence gene
Depositing User: Mohamad Jefri Mohamed Fauzi
Date Deposited: 17 Nov 2021 11:06
Last Modified: 17 Nov 2021 11:06
Altmetrics: http://www.altmetric.com/details.php?domain=psasir.upm.edu.my&doi=10.1007/s42161-019-00383-7
URI: http://psasir.upm.edu.my/id/eprint/86809
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