UPM Institutional Repository

Design and development of sulfonamide-chalcones as antiepileptic candidates: computational and zebrafish-based validation approaches


Citation

Adzahar, Anis Nasuha and Nik Aizan, Nik Nur Farhana and Mohammad Latif, Muhammad Alif and Mohd Fahmi, Muhammad Syafiq Akmal and Ismail, Ahmad Zaidi and Mohd Faudzi, Siti Munirah (2025) Design and development of sulfonamide-chalcones as antiepileptic candidates: computational and zebrafish-based validation approaches. ACS Omega, 10 (46). pp. 55325-55353. ISSN 2470-1343

Abstract

The study aims to develop safer and more effective antiepileptic drugs (AEDs) by targeting the γ-aminobutyric acid type A (GABAA) receptor, an important inhibitory neurotransmitter system involved in the control of neuronal excitability and seizures. With epilepsy rates rising worldwide and current AEDs often causing serious side effects, new neurotherapeutics with better efficacy and safety are urgently needed. In this context, sulfonamides, known for their proven anticonvulsant properties, were selected as the core scaffold for the development of new sulfonamide–chalcone hybrids (compounds 1–36) as potential AED candidates. These compounds were analyzed for their drug-likeness, ADMET profiles, and electronic properties using density functional theory (DFT) calculations. Molecular docking studies were then performed to examine their binding affinity to the GABAAreceptor, revealing that the 4-(trifluoromethyl)sulfonamide-chalcones (19, 20, and 21) had the highest binding affinity (−10.3 to −10.1 kcal/mol) compared to the standard AED, valproic acid (VPA; −5.4 kcal/mol). To further support these findings, molecular dynamics (MD) simulations were performed with the top candidates. Analyses of root-mean-square deviation (RMSD), hydrogen bonding (H-bonds), radius of gyration (Rg), and solvent-accessible surface area (SASA) indicated that compound 20 exhibited the greatest stability throughout the simulation. Subsequently, to address toxicity risks, in vivo zebrafish mortality assays were performed to determine the LC50values before proceeding to behavioral testing. All compounds showed a favorable safety profile and antiepileptic potential, as validated using a pentylenetetrazole (PTZ)-induced seizure zebrafish model. In conclusion, this integrated computational–experimental approach highlights the therapeutic potential of sulfonamide–chalcone hybrids, particularly 4-(trifluoromethyl)-N-(4-(3-(4-(trifluoromethyl)phenyl)acryloyl)phenyl)benzenesulfonamide (compound 20), as potential positive allosteric modulators of the GABAAreceptor, offering a viable pathway for the development of next-generation AEDs with improved efficacy and safety profiles.


Download File

[img] Text
127714.pdf - Published Version
Available under License Creative Commons Attribution Non-commercial No Derivatives.

Download (7MB)
Official URL or Download Paper: https://pubs.acs.org/doi/10.1021/acsomega.5c04809

Additional Metadata

Item Type: Article
Subject: Chemistry (all)
Subject: Chemical Engineering (all)
Divisions: Faculty of Science
Institute of Bioscience
Centre of Foundation Studies for Agricultural Science
DOI Number: https://doi.org/10.1021/acsomega.5c04809
Publisher: American Chemical Society
Keywords: Epilepsy; Antiepileptic drugs; Sulfonamides; Chalcones; GABAA receptor; Computational chemistry; Molecular docking; Molecular dynamics; Zebrafish; Drug discovery
Sustainable Development Goals (SDGs): SDG 3: Good Health and Well-being, SDG 9: Industry, Innovation and Infrastructure, SDG 12: Responsible Consumption and Production
Depositing User: Ms. Nur Faseha Mohd Kadim
Date Deposited: 07 Aug 2026 02:14
Last Modified: 07 Aug 2026 02:14
Altmetrics: http://www.altmetric.com/details.php?domain=psasir.upm.edu.my&doi=10.1021/acsomega.5c04809
URI: http://psasir.upm.edu.my/id/eprint/127714
Statistic Details: View Download Statistic

Actions (login required)

View Item View Item