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Metagenomic of soil microbiota from a tea plantation in Malaysia


Citation

Yip, Zhong Hen and Lim, Xin Rui and Ang, Geik Yong and Yu, Choo Yee (2025) Metagenomic of soil microbiota from a tea plantation in Malaysia. Asia-Pacific Journal of Molecular Biology and Biotechnology, 33 (4). pp. 138-149. ISSN 0128-7451

Abstract

Soil microbiota plays an important role in maintaining soil health and supporting functional ecosystems including tea plantation. In this study, a soil sample from a tea plantation in Malaysia was subjected to 16S rDNA metagenomic sequencing followed by bioinformatic analysis in order to gain insights into the diversity and composition of highland tea plantation soil microbial communities. The microbial composition at the phylum level was dominated by Proteobacteria (50.64%), followed by Acidobacteriota (12.11%), and Bacteroidota (8.97%) whereas at class level, Gammaproteobacteria (31.56%), Alphaproteobacteria (19.08%), and Bacteroidia (8.35%) were predominant in the soil sample. This study reveals a highly diverse bacterial community in the tea soil which plays an important functional role for sustainable tea cultivation. The presence of various low-abundance and unclassified genera also reflects the complex ecological interactions within the tea plantation soil and suggests the potential for discovering novel microbial functions. Overall, our findings highlight the ecological importance of soil microbial communities in highland tea plantation and posit the need to integrate microbial management into sustainable agriculture practices. Continuous efforts are required to profile and understand these microbial ecosystems in the tea plantation in order to enhance the soil fertility, improve crop productivity, and mitigate the long-term environmental impacts in tea-growing regions.


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Additional Metadata

Item Type: Article
Subject: Biotechnology
Subject: Molecular Biology
Divisions: Faculty of Medicine and Health Science
Institute of Bioscience
Faculty of Forestry and Environment
DOI Number: https://doi.org/10.35118/apjmbb.2025.033.4.13
Publisher: University of Malaya
Keywords: 16S; Bacteria; Metagenomic; Microbiota; Soil; Tea
Sustainable Development Goals (SDGs): SDG 15: Life on Land, SDG 2: Zero Hunger, SDG 12: Responsible Consumption and Production
Depositing User: Ms. Nur Faseha Mohd Kadim
Date Deposited: 22 Jun 2026 03:59
Last Modified: 22 Jun 2026 03:59
Altmetrics: http://www.altmetric.com/details.php?domain=psasir.upm.edu.my&doi=10.35118/apjmbb.2025.033.4.13
URI: http://psasir.upm.edu.my/id/eprint/126276
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