Evaluation of Vaca and Caga Genotypes of Helicobacter Pylori in Iranian Patients with Peptic Ulcer Disease

Hossein Abadi, Ali Saber (2007) Evaluation of Vaca and Caga Genotypes of Helicobacter Pylori in Iranian Patients with Peptic Ulcer Disease. Masters thesis, Universiti Putra Malaysia.

[img] PDF
575Kb

Abstract

Helicobacter pylori infection occurs all over the world, and more than half of the world population is infected by this microorganism. Research on the variety of H. pylori genes is valuable from two perspectives; first, for predicting the outcome of the infection and second, for better understanding of its distribution in the world and the evolutionary origins of this organism. It has been suggested that Helicobacter pylori strains containing cagA gene and the s1/m1 genotype of vacuolating cytotoxin gene A (vacA) may be associated with peptic ulcer diseases. Some studies have also shown that allele s1 of the vacA gene is associated with gastroduodenal diseases In order to investigate the cagA and vacA genes, biopsies of the antrum and corpus of the stomachs of patients were obtained. To detect H. pylori infection, the phosphoglucosamine mutase gene (glmM) was amplified through the PCR method and observed on 2% (w/v) agarose gel electrophoresis. All the H. pylori-positive samples were subjected to further PCR amplification to determine different alleles of the vacA gene. The PCR products were separated on 2% (w/v) agarose gels electrophoresis. 37, 15 and 32 out of 84 specimens were duodenal ulcer (DU), gastric ulcer (GU) and gastritis (GT), respectively. Seventy-seven (91.7%, χ2= 58.333, p < 0.05) out of 84 samples were H. pylori-positive. cagA gene was detected in 80% (χ2= 12.6, p < 0.001), 76.9% (χ2= 3.769, p > 0.05), and 48.3% (χ2= 0.034 p > 0.05) from DU, GU and GT samples, respectively. It was found that 66% (23/35) of DU samples, 62% (8/13) of GU samples and none of 29 GT samples were s1/m1. 17% (6/35) of DU samples, 15% (2/13) of GU samples and 52% (16/29) of GT samples were s1/m2. 17% (6/35) of DU samples, 23% (3/13) of GU samples and 48% (13/29) of GT samples were s2/m2. This study demonstrates that the presence of the m2 allele of vacA is strongly associated with gastritis and the presence of allele s1 is associated with peptic ulcers. Helicobacter pylori strains with vacA-s1/m2-cagA+ genotype are associated with peptic ulceration diseases.

Item Type:Thesis (Masters)
Subject:Peptic ulcer
Chairman Supervisor:Professor Patimah Ismail, PhD
Call Number:FPSK(M) 2009 4
Faculty or Institute:Faculty of Medicine and Health Science
ID Code:7161
Deposited By: Nurul Hayatie Hashim
Deposited On:10 Jun 2010 03:17
Last Modified:27 May 2013 07:33

Repository Staff Only: Edit item detail

Document Download Statistics

This item has been downloaded for since 10 Jun 2010 03:17.

View statistics for "Evaluation of Vaca and Caga Genotypes of Helicobacter Pylori in Iranian Patients with Peptic Ulcer Disease"


Universiti Putra Malaysia Institutional Repository

Universiti Putra Malaysia Institutional Repository is an on-line digital archive that serves as a central collection and storage of scientific information and research at the Universiti Putra Malaysia.

Currently, the collections deposited in the IR consists of Master and PhD theses, Master and PhD Project Report, Journal Articles, Journal Bulletins, Conference Papers, UPM News, Newspaper Cuttings, Patents and Inaugural Lectures.

As the policy of the university does not permit users to view thesis in full text, access is only given to the first 24 pages only.